BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B05LP1|AL429013
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1728 1790 0.0
>3x_Contig1728
Length = 20685
Score = 1790 bits (903), Expect = 0.0
Identities = 903/903 (100%)
Strand = Plus / Minus
Query: 1 gggctaaatgactagctggtagtgggcgccgctttggagttgtcaaaacaatatatagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 gggctaaatgactagctggtagtgggcgccgctttggagttgtcaaaacaatatatagag 4398
Query: 61 cttaaacaatggtggttcacagcatgttgaagtcacaattcatagggccttatgttgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 cttaaacaatggtggttcacagcatgttgaagtcacaattcatagggccttatgttgccg 4338
Query: 121 gaagggggcagtaagggaggaaaggaaaataaaatgttgtccacgtgacttacaattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 gaagggggcagtaagggaggaaaggaaaataaaatgttgtccacgtgacttacaattttt 4278
Query: 181 tttcatgaaatttaatcactccgaacgtcttttggcccaagttttcgaggtgaaattcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4277 tttcatgaaatttaatcactccgaacgtcttttggcccaagttttcgaggtgaaattcga 4218
Query: 241 agggatcacacagaagatgtcgcagaatttcactcttttcgcataaagacactgaccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4217 agggatcacacagaagatgtcgcagaatttcactcttttcgcataaagacactgaccttc 4158
Query: 301 ctcgaatgagcttttaagaattaaaggatttcgttccaaggttagcaagtgttatacttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4157 ctcgaatgagcttttaagaattaaaggatttcgttccaaggttagcaagtgttatacttg 4098
Query: 361 gtttatgtgaatttttttaacccttcaacaccggttagggctgattccatttcaatcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4097 gtttatgtgaatttttttaacccttcaacaccggttagggctgattccatttcaatcata 4038
Query: 421 aaaactgtaccaaacactacaatttcatacatattaataatgggtgctgcttacaagatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4037 aaaactgtaccaaacactacaatttcatacatattaataatgggtgctgcttacaagatt 3978
Query: 481 ttcggtatgactgttcaaccacatattttagccatagctaccttgggctctgttttcggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3977 ttcggtatgactgttcaaccacatattttagccatagctaccttgggctctgttttcggt 3918
Query: 541 ggtgcagcttacgccatgtctggttctaaggatgctgaaaaggccaagccagctgttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3917 ggtgcagcttacgccatgtctggttctaaggatgctgaaaaggccaagccagctgttgct 3858
Query: 601 actccagctgctccagctgctggtggttccgacgaatttgacgttgaaaagttgttgggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3857 actccagctgctccagctgctggtggttccgacgaatttgacgttgaaaagttgttgggt 3798
Query: 661 gatttcttgaaggaagaatccaaataaattcaataaagatcaggtatttgaactaccccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3797 gatttcttgaaggaagaatccaaataaattcaataaagatcaggtatttgaactaccccc 3738
Query: 721 cttctatagatgacgattttttaacgatattcaaaatgaaacacgacctcctacacagtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3737 cttctatagatgacgattttttaacgatattcaaaatgaaacacgacctcctacacagtc 3678
Query: 781 tcagtattaaaacagtttccctttttttcatatacatatgtacatgtaatctgataatta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 tcagtattaaaacagtttccctttttttcatatacatatgtacatgtaatctgataatta 3618
Query: 841 taggatacttaaaagttattacattgatttgtgtttatctcagaatagatcgtctagact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 taggatacttaaaagttattacattgatttgtgtttatctcagaatagatcgtctagact 3558
Query: 901 ttg 903
|||
Sbjct: 3557 ttg 3555
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7508
Number of Sequences: 1807
Number of extensions: 7508
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)